For 2mg of Total RNA: - Wash 200mg of oligo dT cellulose (collaborative research, cat. 20002) with 10mL of NETS buffer (100mM NaCl, 10mM EDTA, 10mM Tris HCl pH 8.0, 0.2% SDS) - Spin down, aspirate, repeat twice - Resuspend in 1mL 2xNETS - Add Total RNA in 1 ml - Mix on a gentle shaker at RT for 1 hour - Pour slurry onto a fritted funnel over a vacuum flask. You can also use disposable BioRad columns (10 ml plastic with frit) over a small vac flask using a rubber stopper with a hole in it as a manifold with a 125 ml vac flask the spacing is just right so you can collect the eluates in 14 ml plastic falcon tubes placed inside the flask - Wash resin with 1xNETS five times, 3mL each. - Elute from funnel into a new vacuum flask (or use a new falcon tube) with 1mL, 65C prewarmed 1xETS buffer (Same as NETS, except no NaCl) - Repeat 7 times - Add 1/10th volum 3M NaAcetate, with linear acrylamide as carrier (20ug). - Add equal volume of isopropanol, chill to -20C, then precipitate. - Wash pellet with 70% EtOH. - Resuspend in water. - Quantitate with a spectrophotometer You can also bind in batch and use spin columns: Oligo-dT cellulose (Ambion #10020 costs $130.00/gram) empty spin columns from Bio-Rad (#732-6008 $91.00 for 100) - Use 75 mg of oligo dT cellulose/mg of RNA - Bind in High Salt - wash with NETS buffer (100mM NaCl, 10mM EDTA, 10mM Tris HCl pH 8.0, 0.2% SDS) - elute with 70 C 5 mM Tris pH 7.5