Differences between revisions 23 and 24
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| * Lee JS, Garrett AS, Yen K, Takahashi YH, Hu D, Jackson J, Seidel C, Pugh BF, Shilatifard A. (2012). Codependency of H2B monoubiquitination and nucleosome reassembly on Chd1. Genes Dev. 26(9):914-9. | * Smith KT, Sardiu ME, Martin-Brown SA, Seidel C, Mushegian A, Egidy R, Florens L, Washburn MP, Workman JL. (2012). Human family with sequence similarity 60 member A (FAM60A) protein: a new subunit of the Sin3 deacetylase complex. ''Mol Cell Proteomics.'' 11(12):1815-28. [http://www.ncbi.nlm.nih.gov/pubmed/22984288 PMID: 22984288] |
| Line 13: | Line 13: |
| * Herz HM, Mohan M, Garrett AS, Miller C, Casto D, Zhang Y, Seidel C, Haug JS, Florens L, Washburn MP, Yamaguchi M, Shiekhattar R, Shilatifard A. (2012). Polycomb repressive complex 2-dependent and -independent functions of Jarid2 in transcriptional regulation in Drosophila. Mol Cell Biol. 32(9):1683-93. | * Bose T, Lee KK, Lu S, Xu B, Harris B, Slaughter B, Unruh J, Garrett A, McDowell W, Box A, Li H, Peak A, Ramachandran S, Seidel C, Gerton JL. (2012) Cohesin proteins promote ribosomal RNA production and protein translation in yeast and human cells. ''PLoS Genet.'' 8(6):e1002749. [http://www.ncbi.nlm.nih.gov/pubmed/22719263 PMID: 22719263] |
| Line 15: | Line 15: |
| * Chen G, Bradford WD, Seidel CW, Li R. (2012). Hsp90 stress potentiates rapid cellular adaptation through induction of aneuploidy. Nature. 482(7384):246-50. | * Lee JS, Garrett AS, Yen K, Takahashi YH, Hu D, Jackson J, Seidel C, Pugh BF, Shilatifard A. (2012). Codependency of H2B monoubiquitination and nucleosome reassembly on Chd1. ''Genes Dev.'' 26(9):914-9. [http://www.ncbi.nlm.nih.gov/pubmed/22549955 PMID: 22549955] |
| Line 17: | Line 17: |
| * Gilmore JM, Sardiu ME, Venkatesh S, Stutzman B, Peak A, Seidel CW, Workman JL, Florens L, Washburn MP. (2012). Characterization of a highly conserved histone related protein, Ydl156w, and its functional associations using quantitative proteomic analyses. Mol Cell Proteomics. 11(4):M111.011544. | * Herz HM, Mohan M, Garrett AS, Miller C, Casto D, Zhang Y, Seidel C, Haug JS, Florens L, Washburn MP, Yamaguchi M, Shiekhattar R, Shilatifard A. (2012). Polycomb repressive complex 2-dependent and -independent functions of Jarid2 in transcriptional regulation in Drosophila. ''Mol Cell Biol.'' 32(9):1683-93. |
| Line 19: | Line 19: |
| * Smith ER, Lin C, Garrett AS, Thornton J, Mohaghegh N, Hu D, Jackson J, Saraf A, Swanson SK, Seidel C, Florens L, Washburn MP, Eissenberg JC, Shilatifard A. (2011). The little elongation complex regulates small nuclear RNA transcription. Mol Cell. 44(6):954-65. | * Chen G, Bradford WD, Seidel CW, Li R. (2012). Hsp90 stress potentiates rapid cellular adaptation through induction of aneuploidy. ''Nature.'' 482(7384):246-50. |
| Line 21: | Line 21: |
| * Weake VM, Dyer JO, Seidel C, Box A, Swanson SK, Peak A, Florens L, Washburn MP, Abmayr SM, Workman JL. (2011). Post-transcription initiation function of the ubiquitous SAGA complex in tissue-specific gene activation. Genes Dev. 25(14):1499-509. | * Gilmore JM, Sardiu ME, Venkatesh S, Stutzman B, Peak A, Seidel CW, Workman JL, Florens L, Washburn MP. (2012). Characterization of a highly conserved histone related protein, Ydl156w, and its functional associations using quantitative proteomic analyses. ''Mol Cell Proteomics.'' 11(4):M111.011544. |
| Line 23: | Line 23: |
| * Lin C, Garrett AS, De Kumar B, Smith ER, Gogol M, Seidel C, Krumlauf R, Shilatifard A. (2011). Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC). Genes Dev. 25(14):1486-98. | * Smith ER, Lin C, Garrett AS, Thornton J, Mohaghegh N, Hu D, Jackson J, Saraf A, Swanson SK, Seidel C, Florens L, Washburn MP, Eissenberg JC, Shilatifard A. (2011). The little elongation complex regulates small nuclear RNA transcription. ''Mol Cell.'' 44(6):954-65. |
| Line 25: | Line 25: |
| * Takahashi H, Parmely TJ, Sato S, Tomomori-Sato C, Banks CA, Kong SE, Szutorisz H, Swanson SK, Martin-Brown S, Washburn MP, Florens L, Seidel CW, Lin C, Smith ER, Shilatifard A, Conaway RC, Conaway JW. (2011). Human mediator subunit MED26 functions as a docking site for transcription elongation factors. Cell. 146(1):92-104. | * Weake VM, Dyer JO, Seidel C, Box A, Swanson SK, Peak A, Florens L, Washburn MP, Abmayr SM, Workman JL. (2011). Post-transcription initiation function of the ubiquitous SAGA complex in tissue-specific gene activation. ''Genes Dev.'' 25(14):1499-509. |
| Line 27: | Line 27: |
| * Takahashi YH, Schulze JM, Jackson J, Hentrich T, Seidel C, Jaspersen SL, Kobor MS, Shilatifard A. (2011). Dot1 and histone H3K79 methylation in natural telomeric and HM silencing. Mol Cell. 42(1):118-26. | * Lin C, Garrett AS, De Kumar B, Smith ER, Gogol M, Seidel C, Krumlauf R, Shilatifard A. (2011). Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC). ''Genes Dev.'' 25(14):1486-98. |
| Line 29: | Line 29: |
| * Vo NV, Sowa GA, Kang JD, Seidel C, Studer RK. (2010). Prostaglandin E2 and prostaglandin F2α differentially modulate matrix metabolism of human nucleus pulposus cells. J Orthop Res. 28(10):1259-66. | * Takahashi H, Parmely TJ, Sato S, Tomomori-Sato C, Banks CA, Kong SE, Szutorisz H, Swanson SK, Martin-Brown S, Washburn MP, Florens L, Seidel CW, Lin C, Smith ER, Shilatifard A, Conaway RC, Conaway JW. (2011). Human mediator subunit MED26 functions as a docking site for transcription elongation factors. ''Cell.'' 146(1):92-104. |
| Line 31: | Line 31: |
| * Mastushita-Sakai T, White-Grindley E, Samuelson J, Seidel C, Si K. (2010). Drosophila Orb2 targets genes involved in neuronal growth, synapse formation, and protein turnover. Proc Natl Acad Sci U S A. 107(26):11987-92. | * Takahashi YH, Schulze JM, Jackson J, Hentrich T, Seidel C, Jaspersen SL, Kobor MS, Shilatifard A. (2011). Dot1 and histone H3K79 methylation in natural telomeric and HM silencing. ''Mol Cell.'' 42(1):118-26. |
| Line 33: | Line 33: |
| * Xia S, Li X, Johnson T, Seidel C, Wallace DP, Li R. (2010). Polycystin-dependent fluid flow sensing targets histone deacetylase 5 to prevent the development of renal cysts. Development. 137(7):1075-84. | * Vo NV, Sowa GA, Kang JD, Seidel C, Studer RK. (2010). Prostaglandin E2 and prostaglandin F2α differentially modulate matrix metabolism of human nucleus pulposus cells. ''J Orthop Res.'' 28(10):1259-66. |
| Line 35: | Line 35: |
| * Nugent RL, Johnsson A, Fleharty B, Gogol M, Xue-Franzén Y, Seidel C, Wright AP, Forsburg SL. (2010). Expression profiling of S. pombe acetyltransferase mutants identifies redundant pathways of gene regulation. BMC Genomics. 11:59. | * Mastushita-Sakai T, White-Grindley E, Samuelson J, Seidel C, Si K. (2010). Drosophila Orb2 targets genes involved in neuronal growth, synapse formation, and protein turnover. ''Proc Natl Acad Sci U S A.'' 107(26):11987-92. |
| Line 37: | Line 37: |
| * Jansen JM, Wanless AG, Seidel CW, Weiss EL. (2009). Cbk1 regulation of the RNA-binding protein Ssd1 integrates cell fate with translational control. Curr Biol. 19(24):2114-20. | * Xia S, Li X, Johnson T, Seidel C, Wallace DP, Li R. (2010). Polycystin-dependent fluid flow sensing targets histone deacetylase 5 to prevent the development of renal cysts. ''Development.'' 137(7):1075-84. |
| Line 39: | Line 39: |
| * Fournier ML, Paulson A, Pavelka N, Mosley AL, Gaudenz K, Bradford WD, Glynn E, Li H, Sardiu ME, Fleharty B, Seidel C, Florens L, Washburn MP. (2010). Delayed correlation of mRNA and protein expression in rapamycin-treated cells and a role for Ggc1 in cellular sensitivity to rapamycin. Mol Cell Proteomics. 9(2):271-84. | * Nugent RL, Johnsson A, Fleharty B, Gogol M, Xue-Franzén Y, Seidel C, Wright AP, Forsburg SL. (2010). Expression profiling of S. pombe acetyltransferase mutants identifies redundant pathways of gene regulation. ''BMC Genomics.'' 11:59. |
| Line 41: | Line 41: |
| * Gard S, Light W, Xiong B, Bose T, McNairn AJ, Harris B, Fleharty B, Seidel C, Brickner JH, Gerton JL. (2009). Cohesinopathy mutations disrupt the subnuclear organization of chromatin. J Cell Biol. 187(4):455-62. | * Jansen JM, Wanless AG, Seidel CW, Weiss EL. (2009). Cbk1 regulation of the RNA-binding protein Ssd1 integrates cell fate with translational control. ''Curr Biol.'' 19(24):2114-20. |
| Line 43: | Line 43: |
| * Wang P, Lin C, Smith ER, Guo H, Sanderson BW, Wu M, Gogol M, Alexander T, Seidel C, Wiedemann LM, Ge K, Krumlauf R, Shilatifard A. (2009). Global analysis of H3K4 methylation defines MLL family member targets and points to a role for MLL1-mediated H3K4 methylation in the regulation of transcriptional initiation by RNA polymerase II. Mol Cell Biol. 29(22):6074-85. | * Fournier ML, Paulson A, Pavelka N, Mosley AL, Gaudenz K, Bradford WD, Glynn E, Li H, Sardiu ME, Fleharty B, Seidel C, Florens L, Washburn MP. (2010). Delayed correlation of mRNA and protein expression in rapamycin-treated cells and a role for Ggc1 in cellular sensitivity to rapamycin. ''Mol Cell Proteomics.'' 9(2):271-84. |
| Line 45: | Line 45: |
| * Li B, Jackson J, Simon MD, Fleharty B, Gogol M, Seidel C, Workman JL, Shilatifard A. (2009). Histone H3 Lysine 36 Dimethylation (H3K36me2) Is Sufficient to Recruit the Rpd3s Histone Deacetylase Complex and to Repress Spurious Transcription. J Biol Chem. 284(12):7970-6. | * Gard S, Light W, Xiong B, Bose T, McNairn AJ, Harris B, Fleharty B, Seidel C, Brickner JH, Gerton JL. (2009). Cohesinopathy mutations disrupt the subnuclear organization of chromatin. ''J Cell Biol.'' 187(4):455-62. |
| Line 47: | Line 47: |
| * Rancati G, Pavelka N, Fleharty B, Noll A, Trimble R, Walton K, Perera A, Staehling-Hampton K, Seidel CW, Li R. (2008). Aneuploidy underlies rapid adaptive evolution of yeast cells deprived of a conserved cytokinesis motor. Cell 135(5):879-93. | * Wang P, Lin C, Smith ER, Guo H, Sanderson BW, Wu M, Gogol M, Alexander T, Seidel C, Wiedemann LM, Ge K, Krumlauf R, Shilatifard A. (2009). Global analysis of H3K4 methylation defines MLL family member targets and points to a role for MLL1-mediated H3K4 methylation in the regulation of transcriptional initiation by RNA polymerase II. ''Mol Cell Biol.'' 29(22):6074-85. |
| Line 49: | Line 49: |
| * Moldón A, Malapeira J, Gabrielli N, Gogol M, Gómez-Escoda B, Ivanova T, Seidel C, Ayté J. (2008). Promoter-driven splicing regulation in fission yeast. Nature 455(7215):997-1000. | * Li B, Jackson J, Simon MD, Fleharty B, Gogol M, Seidel C, Workman JL, Shilatifard A. (2009). Histone H3 Lysine 36 Dimethylation (H3K36me2) Is Sufficient to Recruit the Rpd3s Histone Deacetylase Complex and to Repress Spurious Transcription. ''J Biol Chem.'' 284(12):7970-6. |
| Line 51: | Line 51: |
| * Sansó M, Gogol M, Ayté J, Seidel C, Hidalgo E. (2008). Transcription factors Pcr1 and Atf1 have distinct roles in stress- and Sty1-dependent gene regulation. Eukaryot Cell. 7(5):826-35. | * Rancati G, Pavelka N, Fleharty B, Noll A, Trimble R, Walton K, Perera A, Staehling-Hampton K, Seidel CW, Li R. (2008). Aneuploidy underlies rapid adaptive evolution of yeast cells deprived of a conserved cytokinesis motor. ''Cell'' 135(5):879-93. |
| Line 53: | Line 53: |
| * Haug JS, He XC, Grindley JC, Wunderlich JP, Gaudenz K, Ross JT, Paulson A, Wagner KP, Xie Y, Zhu R, Yin T, Perry JM, Hembree MJ, Redenbaugh EP, Radice GL, Seidel C, Li L. (2008) N-cadherin expression level distinguishes reserved versus primed states of hematopoietic stem cells. Cell Stem Cell. 2(4):367-79. |
* Moldón A, Malapeira J, Gabrielli N, Gogol M, Gómez-Escoda B, Ivanova T, Seidel C, Ayté J. (2008). Promoter-driven splicing regulation in fission yeast. ''Nature.'' 455(7215):997-1000. * Sansó M, Gogol M, Ayté J, Seidel C, Hidalgo E. (2008). Transcription factors Pcr1 and Atf1 have distinct roles in stress- and Sty1-dependent gene regulation. ''Eukaryot Cell.'' 7(5):826-35. * Haug JS, He XC, Grindley JC, Wunderlich JP, Gaudenz K, Ross JT, Paulson A, Wagner KP, Xie Y, Zhu R, Yin T, Perry JM, Hembree MJ, Redenbaugh EP, Radice GL, Seidel C, Li L. (2008) N-cadherin expression level distinguishes reserved versus primed states of hematopoietic stem cells. ''Cell Stem Cell.'' 2(4):367-79. |
| Line 57: | Line 61: |
| * Sanso M., Gogol M., Ayte J., Seidel C. and Hidalgo E. (2008). The transcription factors Pcr1 and Atf1 have distinct roles in stress- and Sty1-dependent gene regulation. Eukaryot Cell. 2008 Mar 28 (Epub ahead of print) | * Sanso M., Gogol M., Ayte J., Seidel C. and Hidalgo E. (2008). The transcription factors Pcr1 and Atf1 have distinct roles in stress- and Sty1-dependent gene regulation. ''Eukaryot Cell.'' 7(5):826-35. |
| Line 61: | Line 65: |
| * Bausch C, Noone S, Henry JM, Gaudenz K, Sanderson B, Seidel C, Gerton JL. (2007). Transcription alters chromosomal locations of cohesin in Saccharomyces cerevisiae. Mol Cell Biol. 27(24):8522-32. | * Bausch C, Noone S, Henry JM, Gaudenz K, Sanderson B, Seidel C, Gerton JL. (2007). Transcription alters chromosomal locations of cohesin in Saccharomyces cerevisiae. ''Mol Cell Biol.'' 27(24):8522-32. |
| Line 63: | Line 67: |
| * Li B, Gogol M, Carey M, Lee D, Seidel C, Workman JL. (2007). Combined action of PHD and chromo domains directs the Rpd3S HDAC to transcribed chromatin. Science 316:1050-4. | * Li B, Gogol M, Carey M, Lee D, Seidel C, Workman JL. (2007). Combined action of PHD and chromo domains directs the Rpd3S HDAC to transcribed chromatin. ''Science.'' 316:1050-4. |
| Line 65: | Line 69: |
| * Li B, Gogol M, Carey M, Pattenden SG, Seidel C, Workman JL. (2007). Infrequently transcribed long genes depend on the Set2/Rpd3S pathway for accurate transcription. Genes Dev. 2007 21(11):1422-30. | * Li B, Gogol M, Carey M, Pattenden SG, Seidel C, Workman JL. (2007). Infrequently transcribed long genes depend on the Set2/Rpd3S pathway for accurate transcription. ''Genes Dev.'' 2007 21(11):1422-30. |
| Line 67: | Line 71: |
| * Nazila Salamat-Miller, Jianwen Fang, Christopher W. Seidel, Yassen Assenov, Mario Albrecht, and C. Russell Middaugh (2007). A Network-based Analysis of Polyanion-binding Proteins Utilizing Human Protein Arrays. Journal of Biological Chemistry (282) 10153-63 | * Nazila Salamat-Miller, Jianwen Fang, Christopher W. Seidel, Yassen Assenov, Mario Albrecht, and C. Russell Middaugh (2007). A Network-based Analysis of Polyanion-binding Proteins Utilizing Human Protein Arrays. ''Journal of Biological Chemistry.'' (282) 10153-63 |
| Line 69: | Line 73: |
| * Collins KA, Camahort R, Seidel C, Gerton JL, Biggins S. (2007) The overexpression of a S. cerevisiae centromeric histone H3 variant mutant protein leads to a defect in kinetochore biorientation. Genetics 175:513-25 | * Collins KA, Camahort R, Seidel C, Gerton JL, Biggins S. (2007) The overexpression of a S. cerevisiae centromeric histone H3 variant mutant protein leads to a defect in kinetochore biorientation. ''Genetics.'' 175:513-25 |
| Line 71: | Line 75: |
| * Salamat-Miller, N., Fang, J., Seidel, C.W., Smalter, A., and Middaugh, C.R. (2006). A network-based analysis of polyanion binding proteins utilizing yeast protein arrays. Mol Cell Proteomics 5(12):2263-78. | * Salamat-Miller, N., Fang, J., Seidel, C.W., Smalter, A., and Middaugh, C.R. (2006). A network-based analysis of polyanion binding proteins utilizing yeast protein arrays. ''Mol Cell Proteomics.'' 5(12):2263-78. |
| Line 73: | Line 77: |
| * Li, B., Pattenden, S.G., Lee, D., Gutierrez, J., Chen, J., Seidel, C., Gerton, J., and Workman, J.L. (2005). Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling. Proc. Natl. Acad. Sci. USA. 102(51):18385-90. | * Li, B., Pattenden, S.G., Lee, D., Gutierrez, J., Chen, J., Seidel, C., Gerton, J., and Workman, J.L. (2005). Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling. ''Proc. Natl. Acad. Sci. USA.'' 102(51):18385-90. |
| Line 75: | Line 79: |
| * Sinibaldi R, O'Connell C, Seidel C, Rodriguez H. (2001). Gene expression analysis on medium-density oligonucleotide arrays. Methods Mol. Biol. 170:211-22. | * Sinibaldi R, O'Connell C, Seidel C, Rodriguez H. (2001). Gene expression analysis on medium-density oligonucleotide arrays. ''Methods Mol. Biol.'' 170:211-22. |
| Line 79: | Line 83: |
| * Bidlingmaier, S., Weiss, E., Seidel, C., Drubin, D., and Snyder, M. (2002). The Cbk1p Pathway is Important for Polarized Cell Growth and Cell Separation in Saccharomyces cerevisiae. Mol. Cell. Biol. 21, 2449-2462. | * Bidlingmaier, S., Weiss, E., Seidel, C., Drubin, D., and Snyder, M. (2002). The Cbk1p Pathway is Important for Polarized Cell Growth and Cell Separation in Saccharomyces cerevisiae. ''Mol. Cell. Biol.'' 21, 2449-2462. |
| Line 81: | Line 85: |
| * Seidel CW; Peck LJ. (1994) Purification of a calcium dependent ribonuclease from Xenopus laevis. Nucleic Acids Research 22(8):1456-62. | * Seidel CW; Peck LJ. (1994) Purification of a calcium dependent ribonuclease from Xenopus laevis. ''Nucleic Acids Research.'' 22(8):1456-62. |
| Line 83: | Line 87: |
| * Seidel CW; Peck LJ. (1992) Kinetic control of 5 S RNA gene transcription. Journal of Molecular Biology 227(4):1009-18. | * Seidel CW; Peck LJ. (1992) Kinetic control of 5 S RNA gene transcription. ''Journal of Molecular Biology.'' 227(4):1009-18. |
Chris Seidel
Scientist
Email: <seidel AT SPAMFREE pangloss DOT com>
Homepage: http://www.pangloss.com/seidel/
...
Bibliography
Smith KT, Sardiu ME, Martin-Brown SA, Seidel C, Mushegian A, Egidy R, Florens L, Washburn MP, Workman JL. (2012). Human family with sequence similarity 60 member A (FAM60A) protein: a new subunit of the Sin3 deacetylase complex. Mol Cell Proteomics. 11(12):1815-28. PMID: 22984288
Bose T, Lee KK, Lu S, Xu B, Harris B, Slaughter B, Unruh J, Garrett A, McDowell W, Box A, Li H, Peak A, Ramachandran S, Seidel C, Gerton JL. (2012) Cohesin proteins promote ribosomal RNA production and protein translation in yeast and human cells. PLoS Genet. 8(6):e1002749. PMID: 22719263
Lee JS, Garrett AS, Yen K, Takahashi YH, Hu D, Jackson J, Seidel C, Pugh BF, Shilatifard A. (2012). Codependency of H2B monoubiquitination and nucleosome reassembly on Chd1. Genes Dev. 26(9):914-9. PMID: 22549955
Herz HM, Mohan M, Garrett AS, Miller C, Casto D, Zhang Y, Seidel C, Haug JS, Florens L, Washburn MP, Yamaguchi M, Shiekhattar R, Shilatifard A. (2012). Polycomb repressive complex 2-dependent and -independent functions of Jarid2 in transcriptional regulation in Drosophila. Mol Cell Biol. 32(9):1683-93.
Chen G, Bradford WD, Seidel CW, Li R. (2012). Hsp90 stress potentiates rapid cellular adaptation through induction of aneuploidy. Nature. 482(7384):246-50.
Gilmore JM, Sardiu ME, Venkatesh S, Stutzman B, Peak A, Seidel CW, Workman JL, Florens L, Washburn MP. (2012). Characterization of a highly conserved histone related protein, Ydl156w, and its functional associations using quantitative proteomic analyses. Mol Cell Proteomics. 11(4):M111.011544.
Smith ER, Lin C, Garrett AS, Thornton J, Mohaghegh N, Hu D, Jackson J, Saraf A, Swanson SK, Seidel C, Florens L, Washburn MP, Eissenberg JC, Shilatifard A. (2011). The little elongation complex regulates small nuclear RNA transcription. Mol Cell. 44(6):954-65.
Weake VM, Dyer JO, Seidel C, Box A, Swanson SK, Peak A, Florens L, Washburn MP, Abmayr SM, Workman JL. (2011). Post-transcription initiation function of the ubiquitous SAGA complex in tissue-specific gene activation. Genes Dev. 25(14):1499-509.
Lin C, Garrett AS, De Kumar B, Smith ER, Gogol M, Seidel C, Krumlauf R, Shilatifard A. (2011). Dynamic transcriptional events in embryonic stem cells mediated by the super elongation complex (SEC). Genes Dev. 25(14):1486-98.
Takahashi H, Parmely TJ, Sato S, Tomomori-Sato C, Banks CA, Kong SE, Szutorisz H, Swanson SK, Martin-Brown S, Washburn MP, Florens L, Seidel CW, Lin C, Smith ER, Shilatifard A, Conaway RC, Conaway JW. (2011). Human mediator subunit MED26 functions as a docking site for transcription elongation factors. Cell. 146(1):92-104.
Takahashi YH, Schulze JM, Jackson J, Hentrich T, Seidel C, Jaspersen SL, Kobor MS, Shilatifard A. (2011). Dot1 and histone H3K79 methylation in natural telomeric and HM silencing. Mol Cell. 42(1):118-26.
Vo NV, Sowa GA, Kang JD, Seidel C, Studer RK. (2010). Prostaglandin E2 and prostaglandin F2α differentially modulate matrix metabolism of human nucleus pulposus cells. J Orthop Res. 28(10):1259-66.
Mastushita-Sakai T, White-Grindley E, Samuelson J, Seidel C, Si K. (2010). Drosophila Orb2 targets genes involved in neuronal growth, synapse formation, and protein turnover. Proc Natl Acad Sci U S A. 107(26):11987-92.
Xia S, Li X, Johnson T, Seidel C, Wallace DP, Li R. (2010). Polycystin-dependent fluid flow sensing targets histone deacetylase 5 to prevent the development of renal cysts. Development. 137(7):1075-84.
Nugent RL, Johnsson A, Fleharty B, Gogol M, Xue-Franzén Y, Seidel C, Wright AP, Forsburg SL. (2010). Expression profiling of S. pombe acetyltransferase mutants identifies redundant pathways of gene regulation. BMC Genomics. 11:59.
Jansen JM, Wanless AG, Seidel CW, Weiss EL. (2009). Cbk1 regulation of the RNA-binding protein Ssd1 integrates cell fate with translational control. Curr Biol. 19(24):2114-20.
Fournier ML, Paulson A, Pavelka N, Mosley AL, Gaudenz K, Bradford WD, Glynn E, Li H, Sardiu ME, Fleharty B, Seidel C, Florens L, Washburn MP. (2010). Delayed correlation of mRNA and protein expression in rapamycin-treated cells and a role for Ggc1 in cellular sensitivity to rapamycin. Mol Cell Proteomics. 9(2):271-84.
Gard S, Light W, Xiong B, Bose T, McNairn AJ, Harris B, Fleharty B, Seidel C, Brickner JH, Gerton JL. (2009). Cohesinopathy mutations disrupt the subnuclear organization of chromatin. J Cell Biol. 187(4):455-62.
Wang P, Lin C, Smith ER, Guo H, Sanderson BW, Wu M, Gogol M, Alexander T, Seidel C, Wiedemann LM, Ge K, Krumlauf R, Shilatifard A. (2009). Global analysis of H3K4 methylation defines MLL family member targets and points to a role for MLL1-mediated H3K4 methylation in the regulation of transcriptional initiation by RNA polymerase II. Mol Cell Biol. 29(22):6074-85.
Li B, Jackson J, Simon MD, Fleharty B, Gogol M, Seidel C, Workman JL, Shilatifard A. (2009). Histone H3 Lysine 36 Dimethylation (H3K36me2) Is Sufficient to Recruit the Rpd3s Histone Deacetylase Complex and to Repress Spurious Transcription. J Biol Chem. 284(12):7970-6.
Rancati G, Pavelka N, Fleharty B, Noll A, Trimble R, Walton K, Perera A, Staehling-Hampton K, Seidel CW, Li R. (2008). Aneuploidy underlies rapid adaptive evolution of yeast cells deprived of a conserved cytokinesis motor. Cell 135(5):879-93.
Moldón A, Malapeira J, Gabrielli N, Gogol M, Gómez-Escoda B, Ivanova T, Seidel C, Ayté J. (2008). Promoter-driven splicing regulation in fission yeast. Nature. 455(7215):997-1000.
Sansó M, Gogol M, Ayté J, Seidel C, Hidalgo E. (2008). Transcription factors Pcr1 and Atf1 have distinct roles in stress- and Sty1-dependent gene regulation. Eukaryot Cell. 7(5):826-35.
Haug JS, He XC, Grindley JC, Wunderlich JP, Gaudenz K, Ross JT, Paulson A, Wagner KP, Xie Y, Zhu R, Yin T, Perry JM, Hembree MJ, Redenbaugh EP, Radice GL, Seidel C, Li L. (2008) N-cadherin expression level distinguishes reserved versus primed states of hematopoietic stem cells. Cell Stem Cell. 2(4):367-79.
Seidel, Chris. Introduction to Microarrays. Invited chapter in: Analysis of Microarray Data: A Network Based Approach. Editors: F. Emmert-Streib & M. Dehmer. Wiley (2008).
Sanso M., Gogol M., Ayte J., Seidel C. and Hidalgo E. (2008). The transcription factors Pcr1 and Atf1 have distinct roles in stress- and Sty1-dependent gene regulation. Eukaryot Cell. 7(5):826-35.
- Weake VM, Lee KK, Guelman S, Lin CH, Seidel C, Abmayr SM, Workman JL. (2008). SAGA-mediated H2B deubiquitination controls the development of neuronal connectivity in the Drosophila visual system. EMBO J. 27(2):394-405.
Bausch C, Noone S, Henry JM, Gaudenz K, Sanderson B, Seidel C, Gerton JL. (2007). Transcription alters chromosomal locations of cohesin in Saccharomyces cerevisiae. Mol Cell Biol. 27(24):8522-32.
Li B, Gogol M, Carey M, Lee D, Seidel C, Workman JL. (2007). Combined action of PHD and chromo domains directs the Rpd3S HDAC to transcribed chromatin. Science. 316:1050-4.
Li B, Gogol M, Carey M, Pattenden SG, Seidel C, Workman JL. (2007). Infrequently transcribed long genes depend on the Set2/Rpd3S pathway for accurate transcription. Genes Dev. 2007 21(11):1422-30.
Nazila Salamat-Miller, Jianwen Fang, Christopher W. Seidel, Yassen Assenov, Mario Albrecht, and C. Russell Middaugh (2007). A Network-based Analysis of Polyanion-binding Proteins Utilizing Human Protein Arrays. Journal of Biological Chemistry. (282) 10153-63
Collins KA, Camahort R, Seidel C, Gerton JL, Biggins S. (2007) The overexpression of a S. cerevisiae centromeric histone H3 variant mutant protein leads to a defect in kinetochore biorientation. Genetics. 175:513-25
Salamat-Miller, N., Fang, J., Seidel, C.W., Smalter, A., and Middaugh, C.R. (2006). A network-based analysis of polyanion binding proteins utilizing yeast protein arrays. Mol Cell Proteomics. 5(12):2263-78.
Li, B., Pattenden, S.G., Lee, D., Gutierrez, J., Chen, J., Seidel, C., Gerton, J., and Workman, J.L. (2005). Preferential occupancy of histone variant H2AZ at inactive promoters influences local histone modifications and chromatin remodeling. Proc. Natl. Acad. Sci. USA. 102(51):18385-90.
Sinibaldi R, O'Connell C, Seidel C, Rodriguez H. (2001). Gene expression analysis on medium-density oligonucleotide arrays. Methods Mol. Biol. 170:211-22.
Chris Seidel & Ralph Sinibaldi. (2002). Genechips for Age-Related Gene Expression and Analysis. Invited Chapter in: Oxidative Stress and Aging: Advances in Basic Science, Diagnostics, and Intervention. Editors: Richard G. Cutler & Henry Rodriguez. World Scientific.
Bidlingmaier, S., Weiss, E., Seidel, C., Drubin, D., and Snyder, M. (2002). The Cbk1p Pathway is Important for Polarized Cell Growth and Cell Separation in Saccharomyces cerevisiae. Mol. Cell. Biol. 21, 2449-2462.
Seidel CW; Peck LJ. (1994) Purification of a calcium dependent ribonuclease from Xenopus laevis. Nucleic Acids Research. 22(8):1456-62.
Seidel CW; Peck LJ. (1992) Kinetic control of 5 S RNA gene transcription. Journal of Molecular Biology. 227(4):1009-18.