Describe R/Notes here.
data smoothing:
loess(), runmed()
track <- import("foo.wig") scores <- score(track)
chr1 <- trackchr1 # limit to single chromosome
y <- rep(score(chr1), width(chr1))
x <- as.integer(unlist(ranges(chr1))) lo <- loess(y ~ x)
Revision 3 as of 2009-09-30 04:12:39
Describe R/Notes here.
data smoothing:
loess(), runmed()
track <- import("foo.wig") scores <- score(track)
chr1 <- trackchr1 # limit to single chromosome
y <- rep(score(chr1), width(chr1))
x <- as.integer(unlist(ranges(chr1))) lo <- loess(y ~ x)